WO2006128644A1 - Polymer coating and functionalization of solid surfaces - Google Patents

Polymer coating and functionalization of solid surfaces Download PDF

Info

Publication number
WO2006128644A1
WO2006128644A1 PCT/EP2006/005047 EP2006005047W WO2006128644A1 WO 2006128644 A1 WO2006128644 A1 WO 2006128644A1 EP 2006005047 W EP2006005047 W EP 2006005047W WO 2006128644 A1 WO2006128644 A1 WO 2006128644A1
Authority
WO
WIPO (PCT)
Prior art keywords
polymer
alkyl
glass
coating
silicon
Prior art date
Application number
PCT/EP2006/005047
Other languages
French (fr)
Inventor
Giovanna Pirri
Marcella Chiari
Original Assignee
Giovanna Pirri
Marcella Chiari
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Giovanna Pirri, Marcella Chiari filed Critical Giovanna Pirri
Publication of WO2006128644A1 publication Critical patent/WO2006128644A1/en

Links

Classifications

    • GPHYSICS
    • G01MEASURING; TESTING
    • G01NINVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N33/00Investigating or analysing materials by specific methods not covered by groups G01N1/00 - G01N31/00
    • G01N33/48Biological material, e.g. blood, urine; Haemocytometers
    • G01N33/50Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing
    • G01N33/53Immunoassay; Biospecific binding assay; Materials therefor
    • G01N33/543Immunoassay; Biospecific binding assay; Materials therefor with an insoluble carrier for immobilising immunochemicals
    • G01N33/54353Immunoassay; Biospecific binding assay; Materials therefor with an insoluble carrier for immobilising immunochemicals with ligand attached to the carrier via a chemical coupling agent
    • CCHEMISTRY; METALLURGY
    • C03GLASS; MINERAL OR SLAG WOOL
    • C03CCHEMICAL COMPOSITION OF GLASSES, GLAZES OR VITREOUS ENAMELS; SURFACE TREATMENT OF GLASS; SURFACE TREATMENT OF FIBRES OR FILAMENTS MADE FROM GLASS, MINERALS OR SLAGS; JOINING GLASS TO GLASS OR OTHER MATERIALS
    • C03C17/00Surface treatment of glass, not in the form of fibres or filaments, by coating
    • C03C17/28Surface treatment of glass, not in the form of fibres or filaments, by coating with organic material
    • C03C17/30Surface treatment of glass, not in the form of fibres or filaments, by coating with organic material with silicon-containing compounds
    • GPHYSICS
    • G01MEASURING; TESTING
    • G01NINVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N33/00Investigating or analysing materials by specific methods not covered by groups G01N1/00 - G01N31/00
    • G01N33/48Biological material, e.g. blood, urine; Haemocytometers
    • G01N33/50Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing
    • G01N33/53Immunoassay; Biospecific binding assay; Materials therefor
    • G01N33/543Immunoassay; Biospecific binding assay; Materials therefor with an insoluble carrier for immobilising immunochemicals
    • G01N33/544Immunoassay; Biospecific binding assay; Materials therefor with an insoluble carrier for immobilising immunochemicals the carrier being organic
    • G01N33/545Synthetic resin

Definitions

  • the present invention provides a method for coating glass, silica, silicon-oxide or other materials with brush polymers consisting of one or more blocks one of which is covalently bound to the substrate.
  • the coated surfaces provide sensors able to detect the presence and quantity of biomolecules in biological fluids in different formats including microarray technology.
  • the method used for producing the polymeric coating according to the invention utilizes radical polymerization techniques that allow to control coating architecture and employ monomers with functional groups that do not require activation prior to binding the biological molecule.
  • block polymers brushes are produced by RAFT polymerization to generate substrates for microarray s. Background of the invention
  • molecules carrying -C(S)SR groups are chain transfer agents for radical polymerization of the type described in WO 98/01478.
  • immobilization of molecules on surfaces coated with polymer block generated by a RAFT mechanism In these cases the polymeric coating is achieved by binding radical initiators to the surface.
  • the derivatized surface is immersed in a solution containing: 1) dithiobenzoic derivatives of the type ZC(S)SR wherein Z is, for example, a phenyl group substituted with an tertiary alkyl or with a phenyl group, 2) a radical initiator such as AIBN and 3) allyl monomers.
  • the present invention relates to the coating and functionalization of various type of solid surfaces (glass, silica, silicon oxide) with polymer chains having controlled architecture, particularly useful for the immobilization of biological molecules such as nucleic acids, peptides and proteins. More precisely the invention provides polymer "brushes", i.e. polymer chains originating from the surface containing one or more blocks which are constituted by homopolymers or copolymers one of which is in direct contact with the surface and the others are exposed to the sample solution.
  • the external polymer block carries functional groups directly involved in the immobilization of the biological molecules, e.g. DNA, proteins, polysaccharide molecules and synthetic molecules such as peptides, oligonucleotides or carbohydrates.
  • the immobilization can occur on a portion of the surface or on the entire surface.
  • the coated surface will be preferably used in protein and DNA microarray techniques.
  • the invention provides a method for coating a plastic, glass or silicon oxide surface with "brush"block polymers, which comprises:
  • R is selected from (Cl -C 12) alkyl or substituted alkyl, aliphatic ring or 5 to 10 membered (hetero)aromatic ring optionally substituted; alkylthio, alkoxy, dialkylamino optionally substituted; organometallic compound; Z is selected from hydrogen, chlorine, (C l-C12)alkyl, 5 to 10 membered (hetero)aryl optionally substituted; alkylthio, alkoxycarbonyl, arylossicarbonyl, carboxy; acyloxy or carbamoyl, optionally substituted; cyano; dialkyl or diaryl phosphonate or phoshinate; c) a radical initiator, prefereably AIBN ( ⁇ , ⁇ '-azo-bis-isobutyronitryle)
  • step IV optionally, elongating the polymer with further blocks obtained by polymerization of the mixtures according to step II.
  • the thiol-bearing organosilane is 3- mercaptopropyltrimethoxysilane
  • the dithiobenzoic derivative is 2-cyanoprop- 2-yl dithiobenzoate
  • the monomers are selected from the group comprising N,N-dimethylacrylamide, glicidylmethacrylate, N-acryloylsuccinimide, 2-vinyl-4,4'-dimethylazalactone.
  • the resultant polymeric coating has the formula 1 :
  • the resultant polymeric coating has the formula 2
  • the resultant polymeric coating has the formula 3
  • the invention provides a method for the immobilization of biological molecules on the surface of a plastic, glass or silicon support, which comprises coating said surface as above described and subsequently contacting the coated surface with a solution containing the biological molecules, in suitable conditions for the covalent binding of the biological molecules to the polymers.
  • the invention provides a plastic, glass or silicon-oxide support for the immobilization of biological molecules, having at least one surface coated in accordance with the invention.
  • the support is in form of a multiwell plate, bead, test tube, flask, microscope slide, silicon wafer, silicon membrane or bead.
  • the need of excluding false positive in experiments of molecular recognition on solid phases requires an effective screening of the surface underneath in order to prevent non specific interactions of the biomolecules with the support.
  • the growth of a first polymeric layer with high affinity for the substrate, according to the present invention allows to achieve an efficient screening of the surface thus reducing the number of false positive tests.
  • the improvement obtained by this invention concerns the way surface living chains are generated.
  • the method of the invention provides the immobilization of mercato groups and chain transfer agents on the surface by organosilanization.
  • the mercapto groups are (i) precursors of -SC(S)Z, formed in situ through transesterification reaction and (ii) in the presence of monomers, ditiobenzoic derivatives, of the type reported in 2b, and soluble radical initiators such as AIBN, originate living chains that are terminated by a -SC(S)Z group.
  • the method provided by the invention is advantageous in that the synthesis of mercapto bearing organosilane is much easier than that of organosilane bearing radical initiators such as diazo or -SC(S)Z groups.
  • organosilane bearing radical initiators such as diazo or -SC(S)Z groups.
  • the following examples demonstrate that the density of mercapto groups on a surface derivatized according to the invention, is sufficient to provide a number of living chains that is adequate for the proposed application.
  • the following experimental conditions have been optimized: a) mercapto group surface density, b) type of solvent, c) type and concentration of monomers, d) type and concentration of CTA in solution.
  • the experimental conditions reported in the examples have been chosen to balance the ratio between living and dead chains bound to the surface.
  • the SH group initiates polymer chains that grow mediated by ZC(S)SR groups
  • the mechanism of radical polymerization reported above can, for instance, be used to bind to the substrate a first layer of homopolymer chains constituted by an allylic monomer such as N,N-dimethylacrylamide.
  • This first polymeric segment being living, can reinitiate the polymerization to form a second segment made of a homo- or co-polymeric segment comprising an electrophilic monomers, such as the glycidyl methacrylate or the N-hydroxy succinimide ester.
  • Benzoic acid 600 mg, 5.13 mmol was dissolved in dry and degassed toluene.
  • P 4 Si 0 550 mg, 1.2 mmol
  • AIB ⁇ 2.5 gr , 15 mmol
  • the slides derivatized with mercapto groups (from example 1) were dipped in this solution, under nitrogen atmosphere. The reactor containing the slides was sealed and the polymerization carried out at 60 0 C in an oxygen free environment. After 48 hours the slides were cooled and washed with DMF at room temperature, with THF and with chloroform, then dried in a oven at 60 0 C for 10 minutes.
  • the free polymer in solution was characterized by GPC (in THF as eluent, in polystyrene units) and molecular weight values and polydispersity indexes were reported in Table 1.
  • the surface was characterized by tensiometry measurements, listed in Table 2.
  • the slides derivatized with mercapto groups (from example 1) were dipped in this solution, under nitrogen atmosphere. The reactor containing the slides was sealed and the polymerization carried out at 60 0 C in an oxygen free environment. After 48 hours the slides were cooled and washed with DMF at room temperature, with THF and with chloroform, then dried in a oven at 6O 0 C for 10 minutes.
  • Poly(DMA-b-GMA) graft polymerization In order to introduce the epoxide groups, a solution of glycidyl methacrylate (GMA, 0.7 M) and AIBN (6.5 mM) was prepared in dry and degassed DMF. The grafted poly(DMA)- SC(S)Ph slides were placed in a reactor filled with this monomer solution. The reactor was heated at 60 0 C and the polymerization was carried out for 16 hours. Cooled slides were washed and dried as reported above. Poly(DMA-b-NAS) graft polymerization.
  • GMA glycidyl methacrylate
  • AIBN 6.5 mM
  • N-acryloyloxy succinimide (NAS, 0.7 M) and AIBN (6.5 mM) was prepared in dry and degassed DMF.
  • the grafted poly(DMA)-SC(S)Ph slides were placed in a reactor filled with this monomer solution. The reactor was heated at 60 0 C and the polymerization was carried out for 16 hours. Cooled slides were washed and dried as reported above.
  • PhC(S)SC(CH 3 ) 2 CN living chains
  • Hybridization density After spotting the slides with a 10 ⁇ M solution of 23 mer 5' amino-modified oligonucleotide as reported above, the residual reactive groups of the coating were blocked by dipping the printed slides in 5OmM ethanolamine/0.1% SDS/0.1 M Tris pH 9.0 at 50 0 C for 15 min. After discarding the blocking solution, the slides were rinsed two times with water and shaken for 15 min in 4X SSC/0.1 % SDS buffer, pre-warmed at 50 0 C and briefly rinsed with water.
  • oligonucleotide complementary to the one spotted on the surface, at a 1.0 ⁇ M concentration (2.5 ⁇ L per cm 2 of cover slip) was dissolved in the hybridization buffer (5X SSC, 0.1% SDS and 2% BSA), and immediately applied to microarrays.
  • the slides were first washed with 4X SSC at room temperature to remove the cover slip, then with 2X SSC/0.1% SDS at hybridization temperature for 5 minutes. This operation was repeated two times and was followed by two washing steps with 0.2X SSC and 0.1X SSC for 1 minute at room temperature.
  • the slides were scanned with a Scan Array Express fluorescence scanner from Packard Bioscience (USA) at 22% laser power and 64% PMT.
  • the row data of spot fluorescence intensity were converted to molecules/cm 2 by using a standard curve of fluorescence made from a serial dilution of known amounts of fluorescent oligonucleotide (in the 0.025 to 15 ⁇ M concentration range). The data reported are replicates of 400 spots.
  • Silanated surface by ⁇ -MPS mercapto groups: polymerization carried out starting from monomer and CTA in solution (AIBN as initiator).
  • Silanated and transesterificated surface polymerization carried out starting from dithiobenzoic groups on surface and monomer and CTA in solution (AIBN as initiator)

Abstract

Disclosed is a method for coating glass, silica, silicon-oxide or other materials with brush polymers obtained by RAFT polymerization. The coated surfaces are used to immobilize biomolecules especially for microarray technology applications.

Description

POLYMER COATING AND FUNCTIONALIZATION OF SOLID SURFACES
The present invention provides a method for coating glass, silica, silicon-oxide or other materials with brush polymers consisting of one or more blocks one of which is covalently bound to the substrate. The coated surfaces provide sensors able to detect the presence and quantity of biomolecules in biological fluids in different formats including microarray technology. The method used for producing the polymeric coating according to the invention utilizes radical polymerization techniques that allow to control coating architecture and employ monomers with functional groups that do not require activation prior to binding the biological molecule. According to the present invention, block polymers brushes are produced by RAFT polymerization to generate substrates for microarray s. Background of the invention
In a number of situations it is important to coat the surface of a substrate or of an analytical device with a polymeric coating able to protect the surface or to confer to it the desired properties. The same surface modification can be achieved through physical adsorption or through a chemical binding of a polymer. In the case of substrates that are in contact with biological fluids (for instance contact lenses) the adhesion between the substrate and the coating must be strong and irreversible. In order to improve the strength of the interaction between polymeric species and support surface, this latter can be treated e.g. using the procedures described in US patents no. 4663232, 4311537, 4595632 and 4589964. Also analytical applications require substrates functionalized by suitable coating. An example is given by the microarray technology where the immobilization of biological molecules on different substrates is crucial (Nature Genetics Supplement VoI 21, 1999). In recent years there has been a wide spreading of this technique in different fields of medical and biological research. The methods and materials employed for microarray surface coating determine the success of the technique. US patents no. 5981734, 5861247, 5932711, 6180770, 6121027, 5858653, 5741551, 5512329, 6833276 deal with the problem of irreversibly immobilizing biological probes on glass or other surfaces maintaining characteristics of homogeneity, stability, reproducibility of the coating, high probe grafting density, and absence of non-specific interactions between biological molecules and coated surfaces. The production of polymeric coatings made of low polydispersity chains (Id close to 1) that are still susceptible of radical polymerization can be achieved by different mechanisms of living radical polymerization starting from surfaces on which radical initiators have been immobilized. In particular, the radical addition fragmentation transfer (RAFT) mechanism takes place as shown in the scheme reported below:
I. I 2R nM R - ~ P
Figure imgf000003_0001
III. R- + Monomer — Pn
P1; + Monomer ► P1n
Figure imgf000003_0002
V. I, R, P11, P Dead polymers
wherein molecules carrying -C(S)SR groups are chain transfer agents for radical polymerization of the type described in WO 98/01478. There are few examples of immobilization of molecules on surfaces coated with polymer block generated by a RAFT mechanism. In these cases the polymeric coating is achieved by binding radical initiators to the surface. The derivatized surface is immersed in a solution containing: 1) dithiobenzoic derivatives of the type ZC(S)SR wherein Z is, for example, a phenyl group substituted with an tertiary alkyl or with a phenyl group, 2) a radical initiator such as AIBN and 3) allyl monomers. The polymerization of allyl monomers in these conditions leads to formation of a polymeric coating made of living polymer chains terminated by -SC(S)Z groups able to reinitiate the polymerization in the presence of a radical initiator and of a second monomer (WO 98/01478). Description of the invention
The present invention relates to the coating and functionalization of various type of solid surfaces (glass, silica, silicon oxide) with polymer chains having controlled architecture, particularly useful for the immobilization of biological molecules such as nucleic acids, peptides and proteins. More precisely the invention provides polymer "brushes", i.e. polymer chains originating from the surface containing one or more blocks which are constituted by homopolymers or copolymers one of which is in direct contact with the surface and the others are exposed to the sample solution. The external polymer block carries functional groups directly involved in the immobilization of the biological molecules, e.g. DNA, proteins, polysaccharide molecules and synthetic molecules such as peptides, oligonucleotides or carbohydrates. The immobilization can occur on a portion of the surface or on the entire surface. The coated surface will be preferably used in protein and DNA microarray techniques.
In a first embodiment, the invention provides a method for coating a plastic, glass or silicon oxide surface with "brush"block polymers, which comprises:
I) derivatizing said surface with a thiol-bearing organosilane by reaction with compounds of general formula R'R2R3Si-(CR4R5)nSH wherein R1, R2 and R3 are independently -OCH3, -OCH2CH3 or Cl, R4 is hydrogen and R5 is H or CH3 n is an integer from 2 to 10;
II) attaching to said glass surface a first polymer block obtained through polymerization of a mixture containing: a) monomers of general formula (I) or (II): [CH2=C(RI)C(O)NRIIRπi] (I) [CH2=C(RI)C(O)OR1V] (II) wherein R1 is H or CH3; Rπ,R,RIV can be independently H or a linear or branched Cl -C 12 alkyl chain, optionally interrupted by O, N or S, said alkyl chain optionally bearing functional groups which are selected from epoxy, aldehyde, episulphide, aziridine, ester, thioester, N-hydroxy succinimide ester, pentafluorophenyl ester, dithioester, azalacton, lacton, lactide, anhydride, alogen, cyanate, isothicyanate, double bonds, amino, thiol, hydrazine, methoxy, ethoxy, hydroxyl, trimethoxysilyl, -ORV, -C(O)-ORVI wherein Rv is a C1-C6 alkyl or heterocyclic ring and RVI is a C1-C6 alkyl or phenyl optionally substituted with -OH, -SH5-NH25-CH=O, oxirane. b) dithiobenzoic derivatives of general formula:
/S — R
wherein R is selected from (Cl -C 12) alkyl or substituted alkyl, aliphatic ring or 5 to 10 membered (hetero)aromatic ring optionally substituted; alkylthio, alkoxy, dialkylamino optionally substituted; organometallic compound; Z is selected from hydrogen, chlorine, (C l-C12)alkyl, 5 to 10 membered (hetero)aryl optionally substituted; alkylthio, alkoxycarbonyl, arylossicarbonyl, carboxy; acyloxy or carbamoyl, optionally substituted; cyano; dialkyl or diaryl phosphonate or phoshinate; c) a radical initiator, prefereably AIBN (α,α'-azo-bis-isobutyronitryle)
III) whashing the coated surface with an organic solvent selected from dimethylformamide (DMF), tetrahydrofuran (THF), chloroform (CHCl3 ) or mixtures thereof;
IV) optionally, elongating the polymer with further blocks obtained by polymerization of the mixtures according to step II.
Preferably the thiol-bearing organosilane is 3- mercaptopropyltrimethoxysilane, the dithiobenzoic derivative is 2-cyanoprop- 2-yl dithiobenzoate and the monomers are selected from the group comprising N,N-dimethylacrylamide, glicidylmethacrylate, N-acryloylsuccinimide, 2-vinyl-4,4'-dimethylazalactone.
In one preferred embodiment of the invention, the resultant polymeric coating has the formula 1 :
1-
Figure imgf000006_0001
for /V-acryloyloxy succinimide
Figure imgf000006_0002
for glycidyl methacrylate
wherein the first and the second block are homopolymers, the molecular weight of the polymer ranging from 103 to 106. In another preferred embodiment of the invention, the resultant polymeric coating has the formula 2
2.
Figure imgf000007_0001
R= H, R1= for W-acryloyloxy succinimide
R= CH3, R
Figure imgf000007_0002
for glycidyl methacrylate
wherein the first block is a poly(DMA) homopolymer and y=l-99, 2=99-1 mole%, the molecular weight of the polymer ranging from 103 to 106.
In another preferred embodiment of the invention, the resultant polymeric coating has the formula 3
3.
Figure imgf000007_0003
R= H, R'= for Λ/-acryloyloxy succinimide
Figure imgf000007_0004
Figure imgf000007_0005
for glycidyl methacrylate
Figure imgf000007_0006
wherein the graft polymer is a living random copolymer, X= 1-99 mole%,
Z=99-l%, the molecular weight of the polymer ranging from 103 to 106. In a further embodiment, the invention provides a method for the immobilization of biological molecules on the surface of a plastic, glass or silicon support, which comprises coating said surface as above described and subsequently contacting the coated surface with a solution containing the biological molecules, in suitable conditions for the covalent binding of the biological molecules to the polymers.
In a further embodiment, the invention provides a plastic, glass or silicon-oxide support for the immobilization of biological molecules, having at least one surface coated in accordance with the invention. Preferably the support is in form of a multiwell plate, bead, test tube, flask, microscope slide, silicon wafer, silicon membrane or bead.
The need of excluding false positive in experiments of molecular recognition on solid phases requires an effective screening of the surface underneath in order to prevent non specific interactions of the biomolecules with the support. The growth of a first polymeric layer with high affinity for the substrate, according to the present invention, allows to achieve an efficient screening of the surface thus reducing the number of false positive tests.
The initiation of living or dead polymer chains on the surface of glass or silicon surfaces has been achieved through grafting of a radical initiator on the surface (Prucker, O. and Ruhe, J.; Langmuir 1998, 14(24), 6893-6898; Macromolecules , 1998 31(3), 592-601; Macromolecules, 1998, 31(3), 602-613;). In the literature, the chains of block polymers obtained by a RAFT mechanism are grafted to the surfaces by anchoring a radical initiator on the surface and by carrying out the polymerization in the presence of solution initiators, monomers and dithiobezoic esters. In this way living segments of different living polymers are generated, for instance polystyrene and polydimethylacrylamide, which are able to propagate the chain by addition of a second polymeric segment. One of the functional groups that is widely used to generate radicals is the diazo group. The functionalization of a surface with a diazo group is a complex process that requires asymmetric reagents bearing two distinct functionalities. One end of the molecule must react with substrate silanols and the other must bear the group which upon activation produce radicals. The initiators introduced by Ruhe (O. Prucker and J. Ruhe, "Polymer Layers Through Self- Assembled Monolayers of Initiators", vol. 14, No. 24, p. 6893-6898, American Chemical Society, Oct. 30, 1998) are asymmetric diazo compounds that bear a trichloro silane function at one end, which is reactive towards glass. This type of compounds forms self assembled monolayers on the surface and provide glass surface with a high density of immobilized radical initiators resulting in a high initiation efficiency. However, the difficulty of producing asymmetric diazo compounds with a high yield discourages their use in industrial applications.
The improvement obtained by this invention concerns the way surface living chains are generated. Unlike the methods reported in the literature, where the radical initiators are covalently bound to the surface silanols, the method of the invention provides the immobilization of mercato groups and chain transfer agents on the surface by organosilanization. The mercapto groups are (i) precursors of -SC(S)Z, formed in situ through transesterification reaction and (ii) in the presence of monomers, ditiobenzoic derivatives, of the type reported in 2b, and soluble radical initiators such as AIBN, originate living chains that are terminated by a -SC(S)Z group.
The method provided by the invention is advantageous in that the synthesis of mercapto bearing organosilane is much easier than that of organosilane bearing radical initiators such as diazo or -SC(S)Z groups. The following examples demonstrate that the density of mercapto groups on a surface derivatized according to the invention, is sufficient to provide a number of living chains that is adequate for the proposed application. In particular, the following experimental conditions have been optimized: a) mercapto group surface density, b) type of solvent, c) type and concentration of monomers, d) type and concentration of CTA in solution. The experimental conditions reported in the examples have been chosen to balance the ratio between living and dead chains bound to the surface. By contacting a high thiol density glass surface obtained by organosilanization with 3-mercapto propyl trimethoxysilane with a solution containing, besides monomers, dithiobenzoic groups in solution, acting as CTA, and radical initiators (AIBN) the following reactions take place simultaneously:
1. the SH group transesterificates with the group ZC(S)SR;
2. the SH group initiates polymer chains that grow mediated by ZC(S)SR groups;
3. the SH group terminates the growth of polymer chains.
In the following scheme the hypothetical mechanism of initiation of living chains from the surface is reported:
Figure imgf000010_0001
Figure imgf000010_0002
AIBN, calorβ
Figure imgf000010_0003
The mechanism of radical polymerization reported above can, for instance, be used to bind to the substrate a first layer of homopolymer chains constituted by an allylic monomer such as N,N-dimethylacrylamide. This first polymeric segment, being living, can reinitiate the polymerization to form a second segment made of a homo- or co-polymeric segment comprising an electrophilic monomers, such as the glycidyl methacrylate or the N-hydroxy succinimide ester.
Example 1
Silanization process Or gano silanization with (3-mercaptopropyl)trimethoxy silane. In order to introduce mercapto groups on the glass surface, the slides were covered with a 10% v/v (3-mercapto-2,2-dialkyl-propyl)trimethoxy silane solution in dry tetrahydrofuran (THF) and left in this solution for 12 h at room temperature under nitrogen. After the reaction was completed, the slides were washed with THF, with acetone and then dried under nitrogen in oven at 600C for 30 minutes.
Example 2
2-cyanoprop-2-yl dithiobenzoate synthesis (1)
Benzoic acid (600 mg, 5.13 mmol) was dissolved in dry and degassed toluene. P4Si0 (550 mg, 1.2 mmol) and AIBΝ (2.5 gr , 15 mmol) were added to this solution, under stirring and nitrogen. The reaction flask was warmed at
1100C for 1 h. After cooling, the solution was poured in cold cyclohexane and then filtered. A crude sample, containing the cyanoisopropyl dithiobenzoate
(Rf 0.8 in CHCl3), was recovered and purified by flash chromatography first on silica (CH2Cl2) and then on neutral alumina (petroleum benzine/CH2Cl2
9/1) with an overall yield of 40%. 1H-NMR (δ ppm, CDCl3): 7.93 (d, 2H, o-ArH), 7.56 (dd, lH, /?-ArH), 7.4 (dd, 2H, w-ArH), 1.95 (s,6H, 2 CH3).
(1). Dureault, A.; Gnanou, Y.; Taton, D.; Destarac, M.; Leising, F. Angew. Chem. Int. Ed. 2003, 42, 2869 - 2872. Example 3
Procedure of derivation of glass slides with graft/block polymers
PoIy(DMA) graft homopolymerization. A polymerization solution was prepared by dissolving N1N- dimethylacrylamide (DMA, 1.0 M), cyanoisopropyl dithiobenzoate (5.0 mM) and AIBN (1 mM) in degassed and dry DMF. The ratio [CTA]/[AIBN]= 5/1. The slides derivatized with mercapto groups (from example 1) were dipped in this solution, under nitrogen atmosphere. The reactor containing the slides was sealed and the polymerization carried out at 600C in an oxygen free environment. After 48 hours the slides were cooled and washed with DMF at room temperature, with THF and with chloroform, then dried in a oven at 600C for 10 minutes.
The free polymer in solution was characterized by GPC (in THF as eluent, in polystyrene units) and molecular weight values and polydispersity indexes were reported in Table 1. The surface was characterized by tensiometry measurements, listed in Table 2.
PoIy(DMA) copolymer graft polymerization. A polymerization solution was prepared by dissolving in DMF (degassed and dry) N,N-dimethylacrylamide (DMA, 0.9 M) and the N-acryloyloxy succinimide (0.1M), AIBΝ (1 mM) and cyanoisopropyl dithiobenzoato (5 mM), in a ratio [CTA]/[AIBΝ]= 5/1 were added to the monomer solution. . The slides derivatized with mercapto groups (from example 1) were dipped in this solution, under nitrogen atmosphere. The reactor containing the slides was sealed and the polymerization carried out at 600C in an oxygen free environment. After 48 hours the slides were cooled and washed with DMF at room temperature, with THF and with chloroform, then dried in a oven at 6O0C for 10 minutes.
Poly(DMA-b-GMA) graft polymerization. In order to introduce the epoxide groups, a solution of glycidyl methacrylate (GMA, 0.7 M) and AIBN (6.5 mM) was prepared in dry and degassed DMF. The grafted poly(DMA)- SC(S)Ph slides were placed in a reactor filled with this monomer solution. The reactor was heated at 600C and the polymerization was carried out for 16 hours. Cooled slides were washed and dried as reported above. Poly(DMA-b-NAS) graft polymerization. In order to introduce N- hydroxysuccinimide ester groups, a solution of N-acryloyloxy succinimide (NAS, 0.7 M) and AIBN (6.5 mM) was prepared in dry and degassed DMF. The grafted poly(DMA)-SC(S)Ph slides were placed in a reactor filled with this monomer solution. The reactor was heated at 600C and the polymerization was carried out for 16 hours. Cooled slides were washed and dried as reported above.
Table 1. Molecular weights of polymers in solution
Figure imgf000013_0001
Example 4
Characterization of coatings obtained by tensiometry measurements
Tensiometry measurements were carried out to assess the presence of dithiobenzoic group at the end of polymer chains. For this reason, contact angles were measured either for dead chains of polyDMA grafted obtained by free radical polymerization or for growth in presence of dithiobenzoate
PhC(S)SC(CH3)2CN (living chains).
These measurements highlight a trend to produce an increase in contact angle values for polyDMA terminated by a dithiobenzoic group (phenyl group) with respect to the non-living polyDMA. The surface derivatized by a block polymer poly(DMA-b-GMA) was compared with a surface silanated by (3-glycidyloxypropyl) trimethoxysilane
(γ-GPS). Table 2. Contact angles measured by tensiometry
Static CA (°)/ σ (N)"
Entry Solvent/T [CTA]
Group ratio H2O CH2I2 (°C) [AIBN]
1 Thiol (γ-MPS) THF/RT — 66.4/1.4 36.9/ 1.6 (17) (21)
2 g-pDMA-SC(S)Ph DMF/60 5/1 72.0/2.8 — (10)
3 g-pDMA DMF/60 — 56.0/1.8 — (17)
4 g-pGMA DMF/60 ~ 58.4/4.8 — (17)
5 g-p(DMA-i-GMA) DMF/60 5/1 53.0/1.0 — (12)
6 Glass — — 13.0/3.4 58.8/1.6 (17) (16) b. Number of measurements. Entry descriptions:
1) glass silanated by 3-mercaptopropyl trimethoxysilane (γ-MPS);
2) glass coated by poly(dimethylacrylamide) initiated by AIBN in presence of dithiobenzoic ester (CTA), grafted on the glass as reported in Example 1;
3) glass coated by poly(dimethylacrylamide) initiated by AIBN grafted on the glass, as reported in Example 1 ;
4) glass coated by poly(glycidyl methacrylate) initiated by AIBN in presence of (dithiobenzoic ester) CTA, grafted on the glass as reported in Example 1 ;
5) glass coated by poly(dimethylacrylamide) ended by the dithiobenzoic group -SC(S)Z and restarted in presence of AIBN and 3-glycidyl methacrylate; 6) glass functionalized by (3-glycidyloxypropyl) trimethoxysilane;
7) Glass with no treatment Example 5 Hybridization experiment Oligonucleotides deposition and immobilization. 23-mer oligonucletides bearing an amino group in 3' position, lyophilized an desalted, were dissolved in sodium phosphate buffer 150 mM at a concentration of 10 μM (pH 8.5). A 10 μM solution of this oligonucleotide was printed on coated slides to form 10 X 10 spots subarrays using a QArray2 spotter from Genetix (Hampshire, UK). Printed slides, in an uncovered storage box, were placed in a sealed chamber, saturated with NaCl, and incubated overnight at room temperature.
Hybridization density. After spotting the slides with a 10 μM solution of 23 mer 5' amino-modified oligonucleotide as reported above, the residual reactive groups of the coating were blocked by dipping the printed slides in 5OmM ethanolamine/0.1% SDS/0.1 M Tris pH 9.0 at 500C for 15 min. After discarding the blocking solution, the slides were rinsed two times with water and shaken for 15 min in 4X SSC/0.1 % SDS buffer, pre-warmed at 500C and briefly rinsed with water.
An oligonucleotide, complementary to the one spotted on the surface, at a 1.0 μM concentration (2.5 μL per cm2 of cover slip) was dissolved in the hybridization buffer (5X SSC, 0.1% SDS and 2% BSA), and immediately applied to microarrays. The slides, placed in a hybridization chamber, were transferred to a humidified incubator at a temperature of 65°C for 4 hours.
After hybridization, the slides were first washed with 4X SSC at room temperature to remove the cover slip, then with 2X SSC/0.1% SDS at hybridization temperature for 5 minutes. This operation was repeated two times and was followed by two washing steps with 0.2X SSC and 0.1X SSC for 1 minute at room temperature. The slides were scanned with a Scan Array Express fluorescence scanner from Packard Bioscience (USA) at 22% laser power and 64% PMT.
The row data of spot fluorescence intensity were converted to molecules/cm2by using a standard curve of fluorescence made from a serial dilution of known amounts of fluorescent oligonucleotide (in the 0.025 to 15 μM concentration range). The data reported are replicates of 400 spots.
Description of the Figure
Silanated surface by γ-MPS (mercapto groups): polymerization carried out starting from monomer and CTA in solution (AIBN as initiator).
Silanated and transesterificated surface: polymerization carried out starting from dithiobenzoic groups on surface and monomer and CTA in solution (AIBN as initiator)
Figure imgf000016_0001

Claims

1. Method for coating a plastic, glass or silicon oxide surface with block polymers, which comprises: I) derivatizing said surface with a thiol-bearing organosilane by reaction with compounds of general formula R1R2R3Si-(CR4R5X1SH wherein R',R2 and R3 are independently -OCH3, -OCH2CH3 or Cl, R4 is hydrogen and R5 is H or CH3, n is an integer from 2 to 10;
II) attaching to said glass surface a first polymer block obtained through polymerization of a mixture containing: a) monomers of general formula (I) or (II): [CH2=C(R1OC(O)NR11R111] (I) [CH2=C(Rπ)C(O)ORIV] (II) wherein R' is H or CH3; Rπ,R,RIV can be independently H or a linear or branched Cl -C 12 alkyl chain, optionally interrupted by O, N or S5 said alkyl chain(s) optionally bearing functional groups which are selected from epoxy, aldehyde, episulphide, aziridine, thioester, ester, N-hydroxy succinimide ester, pentafluorophenyl ester, dithioester, azalacton, lacton, lactide, anhydride, alogen, cyanate, isothiocyanate, double bonds, amino, thiol, hydrazine, methoxy, ethoxy, hydroxyl, trimethoxysilyl, -ORV,
-C(O)-ORVI wherein RVI is a C1-C6 alkyl or heterocyclic ring optionally containing one or more nitrogen atoms and RVI is a C1-C6 alkyl or phenyl containing one or more reactive substituents selected from -OH,
-SH5-NH25-CH=O, oxirane. b) dithiobenzoic derivatives of general formula:
/ S- R
C
\ wherein R is selected from (Cl -C 12) alkyl or substituted alkyl, aliphatic ring or 5 to 10 membered (hetero)aromatic ring optionally substituted; alkylthio, alkoxy, dialkylamino optionally substituted; organometallic compound; Z is selected from hydrogen, chlorine, (Cl-C12)alkyl, 5 to 10 membered
(hetero)aryl optionally substituted; alkylthio, alkoxycarbonyl, arylossicarbonyl, carboxy; acyloxy or carbamoyl, optionally substituted; cyano; dialkyl or diaryl phosphonate or phoshinate; c) a radical initiator, prefereably AIBN (α,α'-azo-bis-isobutyronitryle) III) whashing the coated surface with an organic solvent selected from dimethylformamide (DMF), tetrahydrofuran (THF), chloroform (CHCl3 ) or mixtures thereof;
IV) optionally, elongating the polymer with further blocks obtained by polymerization of the mixtures according to step II. 2. Method according to claim 1, wherein the thiol-bearing organosilane is 3-mercaptopropyltrimethoxysilane.
3. Method according to claim 1, wherein the monomers are selected from the group comprising N.N-dimethylacrylamide, glicidylmethacrylate, Ν-acryloylsuccinimide,
2-vinyl-4,4'-dimethylazalactone. 4. Method according to claim 1, wherein the dithiobenzoic derivative is 2-cyanoprop-2-yl dithiobenzoate. 5. Method acording to claim 1, wherein the coating polymer has formula 1 :
Figure imgf000019_0001
for W-acryloyloxy succinimide
Figure imgf000019_0002
Figure imgf000019_0003
for glycidyl methacrylate wherein the first and the second block are homopolymers, the molecular weight of the polymer ranging from 103 to 106.
6. Method acording to claim 1, wherein the coating polymer has formula 2:
Figure imgf000019_0004
R= H, R1= for Λ/-acryloyloxy succinimide
Figure imgf000019_0005
R= CH3, R ^'= > *-^/-~~ for glycidyl methacrylate
wherein the first block is a poly(DMA) homopolymer and y=l-99, z=99-l mole%, the molecular weight of the polymer ranging from 103 to 106.
7. Method acording to claim 1, wherein the coating polymer has formula 3:
3.
Figure imgf000020_0001
R= H, R1= for W-acryloyloxy succinimide
Figure imgf000020_0002
Figure imgf000020_0003
for glycidyl methacrylate
Figure imgf000020_0004
wherein the graft polymer is a living random copolymer, X= 1-99 mole%, Z=99-l%, the molecular weight of the polymer ranging from 103 to 106.
8. A method for the immobilization of biological molecules on the surface of a plastic, glass or silicon support, which comprises coating said surface according to claims 1-8, and subsequently contacting the coated surface with said biological molecules in conditions allowing their covalent binding to the polymers.
9. A plastic, glass or silicon-oxide support for the immobilization of biological molecules, having at least one surface coated according to claims 1-8.
10. A support according to claim 9, which is in form of a multiwell plate, bead, test tube, flask, microscope slide, silicon wafer, silicon membrane or bead.
1 1 The use of a support according to claim 10, for the immobilization of biological molecules.
12. The use of a support according to claim 10, for the manufacture of microarrays for solid phase hybridization techniques.
PCT/EP2006/005047 2005-05-30 2006-05-26 Polymer coating and functionalization of solid surfaces WO2006128644A1 (en)

Applications Claiming Priority (2)

Application Number Priority Date Filing Date Title
EP05011600.3 2005-05-30
EP05011600 2005-05-30

Publications (1)

Publication Number Publication Date
WO2006128644A1 true WO2006128644A1 (en) 2006-12-07

Family

ID=36956029

Family Applications (1)

Application Number Title Priority Date Filing Date
PCT/EP2006/005047 WO2006128644A1 (en) 2005-05-30 2006-05-26 Polymer coating and functionalization of solid surfaces

Country Status (1)

Country Link
WO (1) WO2006128644A1 (en)

Cited By (3)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CN102030482A (en) * 2010-10-13 2011-04-27 中国科学院化学研究所 Method for preparing nanometer patterning bipolymer brush
CN102432745A (en) * 2011-11-28 2012-05-02 苏州大学 Method for preparing active copolymer containing double functional groups including epoxy and tertiary amine
CN114907606A (en) * 2022-06-21 2022-08-16 华东理工大学 Polymer brush surface modification method for active immobilized protein

Citations (4)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
WO1998001478A1 (en) * 1996-07-10 1998-01-15 E.I. Du Pont De Nemours And Company Polymerization with living characteristics
WO2000043539A2 (en) * 1999-01-25 2000-07-27 Biochip Technologies Gmbh Immobilization of molecules on surfaces via polymer brushes
US20030108879A1 (en) * 2001-01-10 2003-06-12 Symyx Technologies, Inc. Polymer brushes for immobilizing molecules to a surface or substrate having improved stability
WO2003083040A2 (en) * 2001-07-30 2003-10-09 Sts Biopolymers, Inc. Graft polymer matrices

Patent Citations (5)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
WO1998001478A1 (en) * 1996-07-10 1998-01-15 E.I. Du Pont De Nemours And Company Polymerization with living characteristics
WO2000043539A2 (en) * 1999-01-25 2000-07-27 Biochip Technologies Gmbh Immobilization of molecules on surfaces via polymer brushes
EP1144677B1 (en) * 1999-01-25 2006-07-26 Micronas Holding GmbH Immobilization of molecules on surfaces via polymer brushes
US20030108879A1 (en) * 2001-01-10 2003-06-12 Symyx Technologies, Inc. Polymer brushes for immobilizing molecules to a surface or substrate having improved stability
WO2003083040A2 (en) * 2001-07-30 2003-10-09 Sts Biopolymers, Inc. Graft polymer matrices

Non-Patent Citations (1)

* Cited by examiner, † Cited by third party
Title
PRUCKER O ET AL: "Polymer Layers through Self-Assembled Monolayers of Initiators", LANGMUIR, AMERICAN CHEMICAL SOCIETY, NEW YORK, NY, US, vol. 14, no. 24, 1998, pages 6893 - 6898, XP002157970, ISSN: 0743-7463 *

Cited By (5)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CN102030482A (en) * 2010-10-13 2011-04-27 中国科学院化学研究所 Method for preparing nanometer patterning bipolymer brush
CN102432745A (en) * 2011-11-28 2012-05-02 苏州大学 Method for preparing active copolymer containing double functional groups including epoxy and tertiary amine
CN102432745B (en) * 2011-11-28 2013-10-09 苏州大学 Method for preparing active copolymer containing double functional groups including epoxy and tertiary amine
CN114907606A (en) * 2022-06-21 2022-08-16 华东理工大学 Polymer brush surface modification method for active immobilized protein
CN114907606B (en) * 2022-06-21 2023-11-17 华东理工大学 Polymer brush surface modification method for active immobilized protein

Similar Documents

Publication Publication Date Title
US6692914B1 (en) Polymer brushes for immobilizing molecules to a surface or substrate, where the polymers have water-soluble or water-dispersible segments and probes bonded thereto
US9834617B2 (en) Method for immobilizing biologic molecules on solid surfaces
US7205161B2 (en) Polymer brushes for immobilizing molecules to a surface or substrate having improved stability
AU2004278408B2 (en) Attachment of molecules to surfaces
US7157269B2 (en) On-spot hydrophilic enhanced slide and preparation thereof
US7517705B2 (en) Phosphorus-containing polymers for optical signal transducers
AU3150400A (en) Immobilization of molecules on surfaces via polymer brushes
JP2007525571A (en) Modified molecular array
US20160200847A1 (en) Clickable polymers and gels for microarray and other applications
RU2216547C2 (en) Method for polymerization immobilization of biological macromolecules and composition for its realization
KR20140137366A (en) Polymer scaffolds for assay applications
US11149301B2 (en) Preparation of universal spin-coatable amine-reactive surface coatings for biomolecule array fabrication
EP1221050A2 (en) Biomolecular attachment sites on microelectronic arrays
JP4640150B2 (en) Biochip and method of use thereof
WO2006128644A1 (en) Polymer coating and functionalization of solid surfaces
JP2006176720A (en) High polymer for medical material and polymer solution using the same
KR100766752B1 (en) PNA chip using plastic substrate coated with polymer having epoxy groups
JP4376813B2 (en) Biochip substrate and biochip
KR101159071B1 (en) Novel hydrogel copolymer, a substrate coated with the copolymer, method for producing a microarray using the copolymer and a microarray produced by the method
JP4534818B2 (en) Polymer compound for biomaterial and polymer solution using the same
JP2020093413A (en) Functional polyolefin
WO2018169726A1 (en) Hydroxyalkylated polyacrylamide surface coatings for in situ synthesis of dna arrays
Fujian Functional polymer-silicon hybrids via surface-initiated living radical polymerizations

Legal Events

Date Code Title Description
121 Ep: the epo has been informed by wipo that ep was designated in this application
NENP Non-entry into the national phase

Ref country code: DE

WWW Wipo information: withdrawn in national office

Country of ref document: DE

NENP Non-entry into the national phase

Ref country code: RU

WWW Wipo information: withdrawn in national office

Country of ref document: RU

122 Ep: pct application non-entry in european phase

Ref document number: 06753904

Country of ref document: EP

Kind code of ref document: A1